Information for 21-GTCAGAAGGAGT (Motif 22)

A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A G T C A C G T A C G T A G T C A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCAGAAGGAGT----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCAGAAGGAGT------
-NTNNNAGGAGTCTCNTN
 A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

NEUROD1/MA1109.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCAGAAGGAGT
GGACAGATGGCAG
 A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCAGAAGGAGT
CACAGCAGGGGG
 A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGAAGGAGT
TGAGTCAGCA-----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGAAGGAGT--
DCHCAGCAGGRGGCC
 A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTCAGAAGGAGT
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTCAGAAGGAGT-
---AGAGGAAGTG
 A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCAGAAGGAGT
---NGAAGC---
 A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGAAGGAGT
DCTCAGCAGG---
 A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A C T G A C T G C G T A A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T