Information for 22-CTGTGTAGGACA (Motif 23)

A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A G T C C G T A A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background140.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGTGTAGGACA--
TGCGGAGTGGGACTGG
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTAGGACA
GCTGTG-------
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTAGGACA
NGCTTTCTAGGAAN
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

RORC/MA1151.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTGTAGGACA
ATAAGTAGGTCA
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTGTAGGACA----
-AAWCTAGGTCARDNN
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGTGTAGGACA
VTGYGKGGGAGK
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTAGGACA-
TATAAGTAGGTCAA
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGTGTAGGACA-
-NBYCAAGGTCAC
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T
A C G T A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTGTGTAGGACA
------AGGTCA
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGTGTAGGACA
-TGTCTAGA---
 A G T C A C G T A C T G A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C C G T A
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T