Information for 13-TTTAGACACC (Motif 30)

A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.959e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background115.1 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTAGACACC-
GGTTAGAGACCT
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTAGACACC
CGTCTAGACA--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTAGACACC
TCTAGACA--
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGACACC-----
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTAGACACC--
-TTTCACACCTN
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTAGACACC-----
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTTAGACACC-
---TGACACCT
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTAGACACC-
-TTTCACACCT
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTAGACACC
-BCAGACWA-
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTAGACACC--
--TTVACACCTH
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C