Information for 15-CGTCTCTGAC (Motif 32)

A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-7.724e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1046.9
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets104.5 +/- 0.5bp
Average Position of motif in Background100.3 +/- 73.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTCTGAC-
VCCTCTCTGDDY
 A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTCTCTGAC-
AGGTCTCTAACC
 A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTCTCTGAC--
TGTCTGDCACCT
 A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGTCTCTGAC--
CTGTCTGTCACCT
 A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGTCTCTGAC---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGTCTCTGAC--
-----TTGACAG
 A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTCTCTGAC--
NAGGTCANTGACCT
 A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGTCTCTGAC---
GAGGTCATTGACCCC
 A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGTCTCTGAC
VBSYGTCTGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGTCTCTGAC---
-----YTGWCADY
 A G T C A C T G A C G T A G T C A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C