Information for 3-TGCGGATATG (Motif 4)

A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGGATATG-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGATATG
TTGCGGTTT--
 A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCGGATATG
TATGCGGGTA--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCGGATATG
CATGCGGGTAC-
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGGATATG-
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCGGATATG
DCCGGAARYN
 A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

ETV5/MA0765.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCGGATATG
ACCGGAAGTG
 A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCGGATATG--
-AAGGATATNTN
 A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGATATG
TTTGCGGTTT--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCGGATATG
RCCGGAARYN
 A C G T A C T G A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G