Information for 4-CACTATTTCA (Motif 5)

A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background120.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACTATTTCA--
--CTATTTTTGG
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACTATTTCA---
-KCTATTTTTRGH
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACTATTTCA---
-GCTATTTTTGGM
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTATTTCA
CACTAATT--
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACTATTTCA---
-GGGATTGCATNN
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTATTTCA---
CTAATATTGCTAAA
 A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACTATTTCA---
CTAATATTGCTAAA
 A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Sox11/MA0869.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACTATTTCA-----
AACAATTTCAGTGTT
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PH0175.1_Vax2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACTATTTCA---
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACTATTTCA---
-GCTATTTTTAGC
 A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C