Information for 5-ATAAGGATTA (Motif 6)

C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C A G T C A C G T A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:ATAAGGATTA--
--VRGGATTARN
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:ATAAGGATTA-
---NGGATTAA
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ATAAGGATTA-----
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ATAAGGATTA-----
TGAACCGGATTAATGAA
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.75
Offset:3
Orientation:forward strand
Alignment:ATAAGGATTA-
---RGGATTAR
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ATAAGGATTA-
---GGGATTAA
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ATAAGGATTA--
--NNGGATTAGN
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ATAAGGATTA---
AAAAACGGATTATTG
 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATAAGGATTA
--NGGGATTA
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATAAGGATTA--
---GGGATTANN
 C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G