Information for 2-TGACACTCTTCA (Motif 8)

A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACACTCTTCA
TGACACCTGTCA
 A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGACACTCTTCA
TGACACCTGTCA
 A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGACACTCTTCA
TTGACAG------
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGACACTCTTCA
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TGIF2/MA0797.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACACTCTTCA
TGACAGCTGTCA
 A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGACACTCTTCA
ARNTGACA-------
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACACTCTTCA
TGACAGCTGTCA
 A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGACACTCTTCA
VGCTGWCAVB-----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACACTCTTCA
TTGACAGG-----
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGACACTCTTCA
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A G T C C G T A
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C