Information for 3-GGAGTCCCAAGT (Motif 9)

A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C T G A C T G A C T G C G T A A G T C A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.026e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGAGTCCCAAGT-
--NNTGCCAAGNN
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGAGTCCCAAGT
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGTCCCAAGT
--GGTGCCAAGT
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGTCCCAAGT---
AGAGTCCAAAGTCCA
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAGTCCCAAGT
GGGGGAATCCCC---
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGTCCCAAGT----
--ATTCCCAAGGGAAT
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGAGTCCCAAGT---
CANAGNNCAAAGTCCA
 A C G T A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGAGTCCCAAGT-
---GTCACATGAY
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGAGTCCCAAGT
-NNTTCCCANN-
 A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGAGTCCCAAGT
AGGGGAATCCCCT--
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T