Information for 3-AGTAATCACA (Motif 12)

C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G G T C A A C G T A C G T G T C A A G T C A C G T
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif81.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets112.2 +/- 53.3bp
Average Position of motif in Background107.3 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP2/MA0593.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTAATCACA
AAGTAAACAAA
 A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGTAATCACA-
NDGTAAACARRN
 A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTAATCACA
DGTAAACA--
 C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A
C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGTAATCACA--
--AAACCACAGC
 C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

FOXP1/MA0481.2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTAATCACA-
AAGTAAACAGAA
 A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T
T C G A C G T A C T A G G A C T T G C A G T C A C T G A G A T C C G T A T C A G C G T A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTAATCACA-
-NAAACCACAG
 C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGTAATCACA----
AAAGTAAACAAAAATT
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXI1/MA0042.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTAATCACA
-GTAAACA--
 C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A
A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTAATCACA
AAAGTAAACA--
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTAATCACA--
--AAACCACANN
 C G T A A C T G A C G T C G T A C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A