Information for 4-TCCAGACAAA (Motif 14)

A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
Reverse Opposite:
A C G T C G A T A C G T A T C G A C G T A G T C A C G T A C T G A C T G C G T A
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.926
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif87.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets120.6 +/- 43.9bp
Average Position of motif in Background100.0 +/- 71.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TCCAGACAAA---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TCCAGACAAA
TCTAGACA--
 A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCCAGACAAA
-CCAGACAG-
 A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGACAAA
ATGCCAGACN--
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCCAGACAAA-
-CCAGACRSVB
 A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCCAGACAAA
-BCAGACWA-
 A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCAGACAAA
CGTCTAGACA--
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCCAGACAAA-
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCAGACAAA
TTTCCCGCCAAA
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCAGACAAA-----
AAACAGACAAAGGAAT
 A C G T A C G T A G T C A G T C C G T A A C T G C G T A A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T