Information for 2-GTGGCCCGGGCA (Motif 2)

A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A G T C A C T G A C T G A C T G A G T C A T G C C G T A A G T C
p-value:1e-14
log p-value:-3.327e+01
Information Content per bp:1.945
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif31.58%
Number of Background Sequences with motif34.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets126.8 +/- 23.1bp
Average Position of motif in Background116.6 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCGGGCA---
-ATGCCCGGGCATGT
 A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTGGCCCGGGCA
AAGGKGRCGCAGGCA
 A C G T A C G T A C G T A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCCGGGCA-
NGTTGCCATGGCAA
 A C G T A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCCCGGGCA-
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTGGCCCGGGCA-
----NGTGGGCAT
 A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTGGCCCGGGCA
--WDNCTGGGCA
 A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCGGGCA----
GTTGCCATGGCAACCG
 A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCCGGGCA--
KGTTGCCATGGCAAC
 A C G T A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCCGGGCA-
GGTTGCCATGGCAA
 A C G T A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCGGGCA--
GTTGCCATGGNAAC
 A C T G C G A T A T C G C T A G A G T C A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C