Information for 10-GGRTGTCMST (Motif 20)

A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T
Reverse Opposite:
C G T A A T G C A C T G A C T G G T C A G T A C C G T A G A C T A G T C A G T C
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.853
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif128.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets152.0 +/- 15.8bp
Average Position of motif in Background100.6 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGRTGTCMST---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGRTGTCMST--
GSCTGTCACTCA
 A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGRTGTCMST
VGCTGWCAVB
 A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PBX2/MA1113.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGRTGTCMST---
-NCTGTCAATCAN
 A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
A C G T A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C

KLF4/MA0039.3/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGRTGTCMST
NNAGGGTGTGG--
 A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T
C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGRTGTCMST---
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGRTGTCMST
--NTGTCAN-
 A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGRTGTCMST---
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGRTGTCMST---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGRTGTCMST---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C G T A C T G A C G T A G T C G T A C T A C G C G A T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T