Information for 4-AACATTAA (Motif 22)

C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.316e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif228.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets103.0 +/- 82.3bp
Average Position of motif in Background89.3 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AACATTAA
GGTTAAACATTAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AACATTAA-
---ATTAAA
 C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AACATTAA-
-YCATTAMC
 C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AACATTAA---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AACATTAA--
GCAAAACATTACTA
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACATTAA
CTAATTAA
 C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AACATTAA
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AACATTAA----
-ATATTAATTAA
 C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AACATTAA
NAACAAT--
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AACATTAA---
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T