Information for 3-AAATAACWYGKT (Motif 3)

C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C C T G A C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif26.32%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets102.0 +/- 41.1bp
Average Position of motif in Background99.4 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAATAACWYGKT-
AAAAATAACAAACGG
 A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAATAACWYGKT
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAATAACWYGKT
AACAAACAACAAGAG
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

GRHL2/MA1105.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAATAACWYGKT----
-NNAAACTGGTTTGNC
 C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G T C A C T G A C T G A C T G A T A G C G C A T C A T G A T C G G C A T G A C T C G A T A C T G C A G T G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AAATAACWYGKT
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAATAACWYGKT---
GANGTTAACTAGTTTNN
 A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATAACWYGKT
CAAATCACTG---
 A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AAATAACWYGKT
GATTATTAATTAACTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AAATAACWYGKT
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AAATAACWYGKT
GCTAAAAATAGC-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T G T C A C G T A A G T C C G A T A G C T A C T G A C T G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T