Information for 19-CAGACTAGTA (Motif 30)

A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background79.8 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTAGTA
BCAGACWA---
 A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTAGTA
CCAGACRSVB-
 A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTAGTA
CCAGACAG---
 A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGACTAGTA-
AAGGCAAGTGT
 A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGACTAGTA------
GAAAACTAGTTAACATC
 A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAGACTAGTA
ATGCCAGACN----
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGACTAGTA-------
--GACTTTTAWTTTGAA
 A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAGACTAGTA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGACTAGTA---
---ACTAGTTAAC
 A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

GRHL2/MA1105.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGACTAGTA---
GACAAACCAGTTTTT
 A C G T A C G T A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C T A G G T C A T G A C G C T A C T G A C G T A T A G C G T A C C G T A A T C G G A C T G A C T G A C T C A G T C A G T