Information for 6-TCAGWAGGAGTG (Motif 6)

A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
Reverse Opposite:
A T G C C G T A A G T C A C G T A T G C G T A C A C G T C G A T A G T C A C G T A C T G C T G A
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.792
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif36.84%
Number of Background Sequences with motif205.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets69.7 +/- 49.0bp
Average Position of motif in Background100.3 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAGWAGGAGTG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAGWAGGAGTG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCAGWAGGAGTG
DCTCAGCAGG----
 A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCAGWAGGAGTG-
DCHCAGCAGGRGGCC
 A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGWAGGAGTG
CACAGCAGGGGG-
 A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCAGWAGGAGTG
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCAGWAGGAGTG
--AGAGGAAGTG
 A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGWAGGAGTG
TCAGTCTT----
 A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCAGWAGGAGTG--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCAGWAGGAGTG
BAGTCATANTGAAAG
 A C G T A C G T A C G T A G C T A G T C C G T A A C T G C G T A T G C A A C T G A T C G C G T A A C T G G C A T A T C G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G