Information for 1-AGCGTATSCA (Motif 7)

C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G C G T A A C G T C G T A A G T C A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.954
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets92.8 +/- 40.5bp
Average Position of motif in Background122.6 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGCGTATSCA-----
NTNNCGTATCCAAGTNN
 A C G T A C G T C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCGTATSCA-
-GHATATKCAT
 C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGTATSCA
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCGTATSCA-----
NNNGTAACTANGNNA
 C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCGTATSCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCGTATSCA-
-GAATATTCAT
 C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCGTATSCA---------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCGTATSCA----
----TATGCAAATC
 C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGCGTATSCA-
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCGTATSCA---
-GCGCATGCGCAC
 C G T A A C T G A G T C A C T G A C G T C G T A A C G T A T G C A G T C C G T A A C G T A C G T A C G T
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C