Information for 1-AVCCTRTAATTA (Motif 1)

C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A
Reverse Opposite:
G C A T C T G A C G T A A C G T C A G T C T G A G A T C C G T A C A T G T C A G A G C T G A C T
p-value:1e-513
log p-value:-1.182e+03
Information Content per bp:1.617
Number of Target Sequences with motif1258.0
Percentage of Target Sequences with motif22.54%
Number of Background Sequences with motif1859.0
Percentage of Background Sequences with motif4.27%
Average Position of motif in Targets99.8 +/- 50.4bp
Average Position of motif in Background101.9 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VAX1/MA0722.1/Jaspar

Match Rank:1
Score:0.91
Offset:5
Orientation:reverse strand
Alignment:AVCCTRTAATTA-
-----NTAATTAG
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:2
Score:0.91
Offset:3
Orientation:forward strand
Alignment:AVCCTRTAATTA-
---NDGTAATTAC
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

VAX2/MA0723.1/Jaspar

Match Rank:3
Score:0.91
Offset:5
Orientation:reverse strand
Alignment:AVCCTRTAATTA-
-----NTAATTAG
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

PDX1/MA0132.2/Jaspar

Match Rank:4
Score:0.90
Offset:5
Orientation:forward strand
Alignment:AVCCTRTAATTA-
-----GTAATTAG
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.90
Offset:4
Orientation:forward strand
Alignment:AVCCTRTAATTA--
----AGTAATTAAC
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C

VSX1/MA0725.1/Jaspar

Match Rank:6
Score:0.90
Offset:5
Orientation:reverse strand
Alignment:AVCCTRTAATTA-
-----NTAATTAG
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G

Lhx4/MA0704.1/Jaspar

Match Rank:7
Score:0.89
Offset:5
Orientation:forward strand
Alignment:AVCCTRTAATTA-
-----TTAATTAA
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T T G C A C G T A A C G T A G C T C T G A T C G A

EMX1/MA0612.1/Jaspar

Match Rank:8
Score:0.89
Offset:4
Orientation:reverse strand
Alignment:AVCCTRTAATTA--
----NNTAATTAGN
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.89
Offset:4
Orientation:forward strand
Alignment:AVCCTRTAATTA--
----CCTAATTATC
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.89
Offset:4
Orientation:forward strand
Alignment:AVCCTRTAATTA--
----TCTAATTAAA
 C T G A T C G A A G T C G T A C G C A T C T A G G A C T G T C A C G T A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A