Information for 16-AACCACDAAT (Motif 11)

C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T
Reverse Opposite:
C T G A G C A T C A G T G C T A T A C G A G C T C T A G A C T G A G C T G C A T
p-value:1e-34
log p-value:-7.859e+01
Information Content per bp:1.585
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets97.6 +/- 42.8bp
Average Position of motif in Background106.4 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AACCACDAAT-
---CACTAATT
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACCACDAAT------
NAGCCATTAATTANTTA
 A C G T C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACCACDAAT------
NAGCCATTAATTANTTA
 A C G T C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACCACDAAT---
GGCCATAAATCAC
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACCACDAAT--
GGCCATAAATCA
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AACCACDAAT--
-GCCATAAATCA
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AACCACDAAT---
-GCTATAAATAGC
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AACCACDAAT---
ATTTACGACAAATAGC
 A C G T A C G T A C G T C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACCACDAAT---
-ACTATAAATAGA
 C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACCACDAAT----
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A T C G A T G A C G A T C T C G A A T G C C G A T G T C A C G T A G A C T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T