Information for 15-AGGCCTSY (Motif 12)

C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
Reverse Opposite:
T C A G T A C G C G T A T A C G A C T G A G T C A G T C A C G T
p-value:1e-32
log p-value:-7.500e+01
Information Content per bp:1.798
Number of Target Sequences with motif1014.0
Percentage of Target Sequences with motif18.17%
Number of Background Sequences with motif5464.0
Percentage of Background Sequences with motif12.56%
Average Position of motif in Targets101.9 +/- 56.2bp
Average Position of motif in Background97.5 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTSY
CNAGGCCT--
 A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTSY
CTAGGCCT--
 A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.80
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTSY
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGCCTSY--
KGGCCYCWTD
 C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C A C G T A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGCCTSY----
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGCCTSY
AAGCTTG-
 C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCCTSY-
-GGCGCGCT
 C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C A C G T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTSY--
TAAGGCGTCTTG
 A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGGCCTSY
NTCAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGCCTSY
CAAGGHCANV
 A C G T A C G T C G T A C T A G A C T G A G T C A T G C A C G T A T G C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G