Information for 20-GGAATTTGGCCA (Motif 15)

C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A
Reverse Opposite:
C A G T C A T G T A C G A G T C G T A C G T C A T G C A T C G A A G C T A C G T T A G C G A T C
p-value:1e-21
log p-value:-4.842e+01
Information Content per bp:1.601
Number of Target Sequences with motif282.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif1189.3
Percentage of Background Sequences with motif2.73%
Average Position of motif in Targets102.4 +/- 52.6bp
Average Position of motif in Background100.1 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GGAATTTGGCCA----
----TYTGACCASWRG
 C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAATTTGGCCA-
ATTGGACTTTGACCCC
 A C G T A C G T A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTGGCCA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTTGGCCA
NTGGAATGTN----
 A C G T A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGAATTTGGCCA
GNNTGGAATGTGN---
 A C G T A C G T A C G T A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTGGCCA---
TGGACTTTGNNCTNTG
 A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAATTTGGCCA
--AAYTAGGTCA
 C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAATTTGGCCA
--AAYTAGGTCA
 C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTGGCCA--
TGGACTTTGNNCTCN
 A C G T C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAATTTGGCCA----
-AAWCTAGGTCARDNN
 C T A G A T C G T G C A T C G A A C G T A C G T C A G T C A T G T C A G A T G C G T A C G T C A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A