Information for 22-GCCAAGCCAAAC (Motif 16)

C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
Reverse Opposite:
A C T G C A G T A C G T C G A T A T C G A C T G T A G C A G C T A C G T A C T G A C T G A G T C
p-value:1e-14
log p-value:-3.344e+01
Information Content per bp:1.858
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.0 +/- 55.9bp
Average Position of motif in Background75.8 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCCAAAC---
TGCCAAAATAAACANN
 A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCCAAAC
CGTGCCAAG------
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGCCAAAC
NNTGCCAAGNN----
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCCAAAC
GGTGCCAAGT-----
 A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGCCAAAC
TTGCCAAG------
 A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAAGCCAAAC-
-ACTAGCCAATCA
 C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCAAGCCAAAC
TTGCCATGGCAACC
 A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGCCAAAC
ATGCCAACC-----
 A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCAAGCCAAAC
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCAAGCCAAAC
GCCACRCCCACY
 C T A G A G T C A G T C C G T A C T G A A C T G T G A C A T G C C G T A C G T A G C T A A G T C
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T