Information for 23-CAGGSTAATTAT (Motif 17)

A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T
Reverse Opposite:
G C T A C A G T C G T A G C T A C A G T C A G T C G T A A T G C A T G C T G A C C G A T C T A G
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.610
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.2 +/- 58.2bp
Average Position of motif in Background118.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0022.1_Dlx3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGGSTAATTAT-----
NNNGGTAATTATNGNGN
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGGSTAATTAT
CACAGN--------
 A C G T A C G T A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0023.1_Dlx4/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGGSTAATTAT-----
GTCGGTAATTATNGNGN
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

MEOX2/MA0706.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGSTAATTAT-
---AGTAATTAAC
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T
A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

Dlx1/MA0879.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGSTAATTAT-
---CCTAATTATC
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T
A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGSTAATTAT-
---GCTAATTAAC
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T
A C G T A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGSTAATTAT----
GCAACCTCATTATNNNN
 A C G T A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGSTAATTAT-----
-AAGGTAATTAGCTCAT
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGGSTAATTAT-
---GGTAATTAGC
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T
A C G T A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGSTAATTAT-----
-ACGGTAATTAGCTCAG
 A G T C G C T A A C T G T A C G T A C G G C A T G T C A G T C A C A G T G C A T G T C A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G