Information for 24-ACACTAGTCT (Motif 20)

C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.941
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets94.9 +/- 48.3bp
Average Position of motif in Background94.6 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACACTAGTCT--
----TWGTCTGV
 C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACACTAGTCT-
NNACTTGCCTT
 C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACACTAGTCT
TGACACCTGTCA
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACACTAGTCT
GAACAATGG---
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACACTAGTCT
AACACGTGTT-
 A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACACTAGTCT
AAAACAATAG---
 A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACACTAGTCT--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACTAGTCT-----
GAAAACTAGTTAACATC
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACACTAGTCT
TGACACCTGTCA
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------ACACTAGTCT----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C A C G T G T C A A C T G A C G T A G T C G C A T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A