Information for 25-CRTACSACGC (Motif 22)

A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C
Reverse Opposite:
C A T G A T G C C T A G A C G T A T C G C A T G A G C T T C G A A G C T C T A G
p-value:1e-2
log p-value:-5.464e+00
Information Content per bp:1.693
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.5 +/- 41.7bp
Average Position of motif in Background68.9 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:CRTACSACGC-
-----CACGCA
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CRTACSACGC-------
--GACCACGCCCTTATT
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

MAX::MYC/MA0059.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CRTACSACGC----
---ACCACGTGCTC
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CRTACSACGC--
--TBGCACGCAA
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CRTACSACGC---
---GGCACGCGTC
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CRTACSACGC--
----GCACGTNC
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CRTACSACGC-
---NCCACGTG
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T
A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CRTACSACGC---
---ACCACGTGCT
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CRTACSACGC------
--GGCCACGCCCCCTT
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

MXI1/MA1108.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CRTACSACGC----
-CGACCACGTGCCC
 A G T C T C G A A C G T C T G A G T A C A T G C C G T A A G T C A T C G G T A C A C G T A C G T A C G T A C G T
A C G T T A G C T A C G T C G A T A G C T G A C T C G A A G T C T C A G A G C T A T C G A T G C A T G C A T G C