Information for 19-SCTTGTWC (Motif 12)

A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C
Reverse Opposite:
C A T G C G A T C G T A A G T C C G T A C G T A C T A G A T C G
p-value:1e-23
log p-value:-5.307e+01
Information Content per bp:1.812
Number of Target Sequences with motif1824.0
Percentage of Target Sequences with motif32.69%
Number of Background Sequences with motif11669.1
Percentage of Background Sequences with motif26.64%
Average Position of motif in Targets265.2 +/- 193.6bp
Average Position of motif in Background232.7 +/- 145.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-SCTTGTWC-
YCTTTGTTCC
 A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-SCTTGTWC-
CCWTTGTYYB
 A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--SCTTGTWC-
NNCTTTGTTNN
 A C G T A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-SCTTGTWC-
CCATTGTTNY
 A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----SCTTGTWC----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----SCTTGTWC----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:SCTTGTWC
-ATTGTT-
 A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------SCTTGTWC
AGGVNCCTTTGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--SCTTGTWC
NCCATTGTTC
 A C G T A C G T A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:SCTTGTWC--
-ATTGTTTAN
 A T G C A G T C A C G T A C G T A C T G A C G T C G T A G T A C A C G T A C G T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C