Information for 21-GGCCTSBB (Motif 13)

T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
Reverse Opposite:
T C G A T G C A A T G C G C T A T C A G A C T G A T G C A G T C
p-value:1e-19
log p-value:-4.430e+01
Information Content per bp:1.560
Number of Target Sequences with motif929.0
Percentage of Target Sequences with motif16.65%
Number of Background Sequences with motif5455.2
Percentage of Background Sequences with motif12.46%
Average Position of motif in Targets270.0 +/- 196.5bp
Average Position of motif in Background230.8 +/- 149.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GGCCTSBB
AGGCCTAG-
 A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGCCTSBB
AGGCCTNG-
 A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.83
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTSBB
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSBB-
KGGCCYCWTD
 A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCTSBB
GGCGCGCT
 T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTSBB
BNTGDCCTTG-
 A C G T A C G T A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSBB
TGACCTYA-
 A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCTSBB--
ATGCCCTGAGGC
 A C G T A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTSBB--
WTGSCCTSAGGS
 A C G T A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T A C G T A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSBB-
TGACCTTGAN
 A C G T T C A G T A C G T G A C A G T C C G A T T A C G A C G T A G C T A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A