Information for 6-CTGGCGCC (Motif 5)

A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C
Reverse Opposite:
C A T G T A C G G T A C C A T G G T A C G A T C C G T A T C A G
p-value:1e-89
log p-value:-2.052e+02
Information Content per bp:1.661
Number of Target Sequences with motif1371.0
Percentage of Target Sequences with motif24.57%
Number of Background Sequences with motif6294.7
Percentage of Background Sequences with motif14.37%
Average Position of motif in Targets296.8 +/- 214.6bp
Average Position of motif in Background233.7 +/- 146.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCGCC---
TTTGGCGCCAAA
 A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGGCGCC--
--GGCGCGCT
 A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCGCC
NTTGGCANN
 A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTGGCGCC-
---GCTCCG
 A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTGGCGCC-----
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCGCC-----
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCGCC------
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCGCC
GGTTGGCAT-
 A C G T A C G T A G T C G C A T C T A G C A T G G T A C C A T G A T G C G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T