Information for 19-GGCCTSKT (Motif 13)

C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
Reverse Opposite:
T G C A T G C A A T G C C G T A C T A G A C T G A T G C A G T C
p-value:1e-25
log p-value:-5.872e+01
Information Content per bp:1.727
Number of Target Sequences with motif1512.0
Percentage of Target Sequences with motif28.70%
Number of Background Sequences with motif9918.2
Percentage of Background Sequences with motif22.46%
Average Position of motif in Targets286.9 +/- 212.4bp
Average Position of motif in Background242.2 +/- 156.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGCCTSKT
AGGCCTAG-
 A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTSKT
CNAGGCCT---
 A C G T A C G T A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.79
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTSKT
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSKT-
KGGCCYCWTD
 A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGCCTSKT
GGCGCGCT
 C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSKT
TGACCTYA-
 A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCTSKT------
GAGCCCTTGTCCCTAA
 A C G T A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTSKT
NTTGGCANN--
 A C G T A C G T A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTSKT
BNTGDCCTTG-
 A C G T A C G T A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTSKT
TGACCYCT-
 A C G T C T A G A T C G T A G C G A T C G C A T A T C G A C G T A C G T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T