Information for 24-GCCACCCA (Motif 14)

A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A C T G A C G T A C T G A C T G A G T C
p-value:1e-15
log p-value:-3.462e+01
Information Content per bp:1.960
Number of Target Sequences with motif293.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1499.0
Percentage of Background Sequences with motif3.39%
Average Position of motif in Targets300.7 +/- 222.5bp
Average Position of motif in Background241.1 +/- 152.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCCA--
AGACCACCCASR
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCCA--
GGACCACCCACG
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCCA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GCCACCCA----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCA
ATGCCAACC-
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCCA-----
NGGCCTCCCAGGGAG
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCACCCA
TGCCAGCB-
 A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCCACCCA----
YCCGCCCACGCN
 A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCACCCA--
AGCCACTCAAG
 A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCA-----
AAGCCCCCCAAAAAT
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T