Information for 3-RTGACTCA (Motif 2)

T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A
Reverse Opposite:
C G A T A C T G T C G A T A C G A C G T T G A C G T C A A G C T
p-value:1e-154
log p-value:-3.556e+02
Information Content per bp:1.681
Number of Target Sequences with motif1326.0
Percentage of Target Sequences with motif25.17%
Number of Background Sequences with motif5242.1
Percentage of Background Sequences with motif11.87%
Average Position of motif in Targets255.3 +/- 186.1bp
Average Position of motif in Background246.9 +/- 155.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTGACTCA--
ATGASTCATH
 T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T
T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RTGACTCA--
ATGACTCATC
 T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCA-
RATGASTCAT
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCA---
DATGASTCATHN
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCA---
NATGACTCATNN
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T A C G T
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RTGACTCA---
DATGASTCATNN
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCA---
NATGASTCABNN
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T A C G T A C G T
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCA-
GGATGACTCAT
 A C G T A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

FOSL2::JUNB/MA1138.1/Jaspar

Match Rank:9
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCA-
GATGACTCAT
 A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T
A C T G T C G A A C G T A C T G C G T A A T G C C A G T G T A C C G T A A G C T

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCA-
GGATGACTCAT
 A C G T A C G T T C G A C A G T A C T G G T C A A T G C A G C T T G A C C G T A A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T