Information for 11-RCWCTGTG (Motif 6)

T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G
Reverse Opposite:
G T A C C G T A A T G C C G T A A T C G C G A T C A T G A G C T
p-value:1e-47
log p-value:-1.097e+02
Information Content per bp:1.743
Number of Target Sequences with motif2531.0
Percentage of Target Sequences with motif48.04%
Number of Background Sequences with motif16852.3
Percentage of Background Sequences with motif38.16%
Average Position of motif in Targets285.1 +/- 220.0bp
Average Position of motif in Background243.3 +/- 156.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RCWCTGTG--
CCWTTGTYYB
 T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----RCWCTGTG
AGGVNCCTTTGT-
 A C G T A C G T A C G T A C G T A C G T T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RCWCTGTG
--GCTGTG
 T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RCWCTGTG--
NNCTTTGTTNN
 A C G T T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RCWCTGTG-
NNCCATTGTNN
 A C G T A C G T T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RCWCTGTG----
-GTCTGTGGTTT
 T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RCWCTGTG
CCTTTGTT
 T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----RCWCTGTG--
YDGHTACAWTGTADC
 A C G T A C G T A C G T A C G T A C G T T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RCWCTGTG-----
-NNHTGTGGTTWN
 T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----RCWCTGTG--
TWGHWACAWTGTWDC
 A C G T A C G T A C G T A C G T A C G T T C G A G T A C C G T A A T G C G C A T A T C G A C G T C A T G A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C