Information for 16-GATTTATG (Motif 10)

A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G
Reverse Opposite:
A G T C C G T A A C G T C T G A C G T A C G T A A C G T G T A C
p-value:1e-32
log p-value:-7.442e+01
Information Content per bp:1.897
Number of Target Sequences with motif716.0
Percentage of Target Sequences with motif12.83%
Number of Background Sequences with motif3563.7
Percentage of Background Sequences with motif8.13%
Average Position of motif in Targets268.7 +/- 197.3bp
Average Position of motif in Background230.4 +/- 142.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0594.1_Hoxa9/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATG--
TGATTTATGGC
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATG---
TGATTTATGGCC
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

MA0485.1_Hoxc9/Jaspar

Match Rank:3
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATG---
NTGATTTATGGCC
 A C G T A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATG---
TGATTTATGGCC
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATG-
TGATTGATGA
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GATTTATG---
TGATTRATGGCY
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATG--
ATGATKGATGRC
 A C G T A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GATTTATG-----
ACATTCATGACACG
 A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GATTTATG--
NTTTTATGAC
 A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

MA0070.1_PBX1/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GATTTATG-
TTTGATTGATGN
 A C G T A C G T A C G T A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G