Information for 7-TTGCATCA (Motif 3)

A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G G T A C C G T A C G T A
p-value:1e-89
log p-value:-2.067e+02
Information Content per bp:1.916
Number of Target Sequences with motif665.0
Percentage of Target Sequences with motif11.92%
Number of Background Sequences with motif2207.9
Percentage of Background Sequences with motif5.04%
Average Position of motif in Targets259.3 +/- 182.2bp
Average Position of motif in Background225.7 +/- 142.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TTGCATCA-
ATTGCATCAT
 A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATCA-
ATTGCATCAK
 A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TTGCATCA--
TTGCAACATN
 A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TTGCATCA-
TATTGCACAAT
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T
C A G T T C G A A C G T A C G T C A T G A G T C C T G A G A T C G T C A C G T A A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TTGCATCA
ATTGCATAA
 A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

MA0102.3_CEBPA/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTGCATCA--
ATTGCACAATA
 A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

MA0488.1_JUN/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTGCATCA----
ATGACATCATCNN
 A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A A C G T A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTGCATCA
ATTTGCATAA
 A C G T A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

MA0025.1_NFIL3/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGCATCA
ANGTTACATAA
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGCATCA
GGGATTGCATNN
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T