Information for 8-YTGGCARG (Motif 4)

G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G
Reverse Opposite:
A G T C A G C T C G A T A C T G A T G C G A T C C G T A C T G A
p-value:1e-87
log p-value:-2.007e+02
Information Content per bp:1.503
Number of Target Sequences with motif2284.0
Percentage of Target Sequences with motif40.93%
Number of Background Sequences with motif12492.2
Percentage of Background Sequences with motif28.51%
Average Position of motif in Targets266.0 +/- 188.8bp
Average Position of motif in Background231.2 +/- 151.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFI-halfsite(CTF)/LNCaP-NFI-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:YTGGCARG
TTGCCAAG
 G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:YTGGCARG
TTGGCA--
 G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------YTGGCARG--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-YTGGCARG-
VBTGWCAGCB
 A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---YTGGCARG
GGTCTGGCAT-
 A C G T A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--YTGGCARG
TNNGGGCAG-
 A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YTGGCARG---
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---YTGGCARG-----
GTATTGACAGGTNNTT
 A C G T A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YTGGCARG------
CTGGCAGNCTGCCA
 G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---YTGGCARG-----
NNATTGACAGGTGCTT
 A C G T A C G T A C G T G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T