Information for 9-CHGGCGCC (Motif 5)

A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
Reverse Opposite:
A C T G T A C G G A T C A C T G A G T C A G T C C G T A T A C G
p-value:1e-64
log p-value:-1.480e+02
Information Content per bp:1.715
Number of Target Sequences with motif1225.0
Percentage of Target Sequences with motif21.95%
Number of Background Sequences with motif5952.9
Percentage of Background Sequences with motif13.58%
Average Position of motif in Targets298.0 +/- 215.5bp
Average Position of motif in Background233.8 +/- 149.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CHGGCGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CHGGCGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CHGGCGCC--
--GGCGCGCT
 A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C A C G T A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CHGGCGCC-----
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CHGGCGCC
TTGGCA--
 A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CHGGCGCC
-CGGAGC-
 A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

MA0597.1_THAP1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CHGGCGCC
TNNGGGCAG-
 A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CHGGCGCC
NNCAGGTGNN
 A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CHGGCGCC-----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CHGGCGCC
GGTCTGGCAT-
 A C G T A C G T A C G T A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T