Information for 13-WAACCACA (Motif 7)

C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A
Reverse Opposite:
G C A T A C T G G A C T A T C G C T A G A G C T G A C T G C T A
p-value:1e-40
log p-value:-9.255e+01
Information Content per bp:1.710
Number of Target Sequences with motif656.0
Percentage of Target Sequences with motif11.76%
Number of Background Sequences with motif2988.5
Percentage of Background Sequences with motif6.82%
Average Position of motif in Targets268.2 +/- 209.2bp
Average Position of motif in Background232.3 +/- 144.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-WAACCACA-
NAAACCACAG
 A C G T C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-WAACCACA---
NWAACCACADNN
 A C G T C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:WAACCACA--
AAACCACANN
 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:WAACCACA--
AAACCACAGC
 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:WAACCACA---
AAACCACAGAN
 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-WAACCACA------
CAAACCACAAACCCC
 A C G T C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C T A T C G A T C G A G T A C A G T C C G T A T G A C G T C A T C G A T G C A T G A C G T A C G T A C T G A C

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:WAACCACA
-ATCCAC-
 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----WAACCACA-----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----WAACCACA----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:WAACCACA------
--ACCACATCCTGT
 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T