Information for 21-GCCAGCTG (Motif 11)

A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G
Reverse Opposite:
A T G C G C T A A C T G A G T C A C G T A C T G T A C G T A G C
p-value:1e-75
log p-value:-1.741e+02
Information Content per bp:1.809
Number of Target Sequences with motif2490.0
Percentage of Target Sequences with motif20.39%
Number of Background Sequences with motif5305.2
Percentage of Background Sequences with motif14.24%
Average Position of motif in Targets100.3 +/- 56.6bp
Average Position of motif in Background100.2 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTG---
-HCAGCTGDTN
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:GCCAGCTG---
-CCAGCTGTTN
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GCCAGCTG---
-NCAGCTGCTG
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCTG--
NNVVCAGCTGBN
 A C G T A C G T A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:GCCAGCTG--
--CAGCTGTT
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCTG-
NNACAGCTGC
 A C G T A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTG--
NNGCAGCTGTC
 A C G T A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCCAGCTG----
GCCAGCTGBTNB
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:9
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GCCAGCTG---
-MCAGCTGBYH
 A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C

ASCL1/MA1100.1/Jaspar

Match Rank:10
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCTG----
NNCCAGCTGCTNN
 A C G T A T C G A T G C A G T C G T C A A C T G G T A C C G A T T A C G A C G T A C G T A C G T A C G T
A T G C T A C G T A G C T A G C T G C A A T C G T A G C G C A T A T C G A G T C G A C T A T C G A T G C