Information for 20-TGAATGVCKC (Motif 15)

C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
Reverse Opposite:
C T A G T G A C A T C G A G T C G A T C C G T A A C G T C A G T T A G C G C T A
p-value:1e-49
log p-value:-1.136e+02
Information Content per bp:1.658
Number of Target Sequences with motif487.0
Percentage of Target Sequences with motif3.99%
Number of Background Sequences with motif704.1
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets102.2 +/- 55.8bp
Average Position of motif in Background98.0 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGVCKC
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGAATGVCKC-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TGAATGVCKC--
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAATGVCKC
TTGATTGN---
 A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGAATGVCKC
GAATGAATGAATG
 A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TGAATGVCKC
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGVCKC
GGCMATGAAA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAATGVCKC--
GGAGAAAGGTGCGA
 A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGAATGVCKC
GGYAATGAAA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAATGVCKC
GTTAATGGCC-
 A C G T C G A T A T C G G T C A G T C A C G A T C T A G T C A G T A G C A C T G G A T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T