Information for 2-NCTGTGGTTW (Motif 3)

G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
Reverse Opposite:
G C T A C T G A T C G A G T A C A G T C C G T A A G T C G C T A T C A G C A T G
p-value:1e-276
log p-value:-6.356e+02
Information Content per bp:1.714
Number of Target Sequences with motif2469.0
Percentage of Target Sequences with motif20.22%
Number of Background Sequences with motif3552.5
Percentage of Background Sequences with motif9.54%
Average Position of motif in Targets97.9 +/- 53.4bp
Average Position of motif in Background100.2 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:NCTGTGGTTW-
-CTGTGGTTTN
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NCTGTGGTTW
GCTGTGGTTT
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NCTGTGGTTW
GTCTGTGGTTT
 A C G T G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-NCTGTGGTTW-
NNHTGTGGTTWN
 A C G T G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NCTGTGGTTW
NNTGTGGTTT
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:NCTGTGGTTW
TTTGCGGTTT
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:NCTGTGGTTW
-TTGCGGTTT
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:NCTGTGGTTW
---GTGGAT-
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-NCTGTGGTTW-
NTCGGTGGTCGC
 A C G T G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:NCTGTGGTTW---
--TGTGGATTNNN
 G T A C A G T C C G A T A C T G G C A T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A