Information for 16-CTGTCTGG (Motif 9)

T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G
Reverse Opposite:
A T G C A G T C C G T A A T C G C G T A A G T C C G T A A C T G
p-value:1e-96
log p-value:-2.220e+02
Information Content per bp:1.870
Number of Target Sequences with motif1916.0
Percentage of Target Sequences with motif15.69%
Number of Background Sequences with motif3598.7
Percentage of Background Sequences with motif9.66%
Average Position of motif in Targets101.4 +/- 55.1bp
Average Position of motif in Background101.0 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CTGTCTGG
CTGTCTGG
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.93
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGG
VBSYGTCTGG
 A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CTGTCTGG-
-TGTCTAGA
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CTGTCTGG
TWGTCTGV
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CTGTCTGG---
-GGTCTGGCAT
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCTGG--
VCCTCTCTGDDY
 A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTGTCTGG-----
CTGTCTGTCACCT
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGTCTGG-----
-TGTCTGDCACCT
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCTGG---
-TGTCTAGACG
 T G A C A C G T A C T G A C G T A T G C A C G T C T A G T A C G A C G T A C G T A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G