Information for 23-CWTTGCTTTGCW (Motif 11)

A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T
Reverse Opposite:
C G T A A C T G A T G C C G T A C T G A C G T A A C T G A G T C G T C A C G T A C G A T A C T G
p-value:1e-7
log p-value:-1.649e+01
Information Content per bp:1.818
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif116.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets118.5 +/- 60.5bp
Average Position of motif in Background104.9 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CWTTGCTTTGCW---
CTTTGTTATGCAAAT
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CWTTGCTTTGCW
CTTTGATGTGSB
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CWTTGCTTTGCW
--TTTCATTRCC
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T
A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CWTTGCTTTGCW---
CATTGTTATGCAAAT
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CWTTGCTTTGCW-----
NNTTCCTTTGATCTNNA
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWTTGCTTTGCW
CCATTGTTTT---
 A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CWTTGCTTTGCW-----
NNTTCCTTTGATCTANA
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CWTTGCTTTGCW--
---NNCTTTGTTNN
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CWTTGCTTTGCW----
--TNCCTTTGATCTTN
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CWTTGCTTTGCW-----
ATTTCCTTTGATCTATA
 A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A