Information for 25-CACCAGGATGAT (Motif 12)

A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C C G T A A C G T A G T C A G T C A C G T C T A G A C T G A C G T A C T G
p-value:1e-2
log p-value:-5.520e+00
Information Content per bp:1.971
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.05%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets129.8 +/- 37.5bp
Average Position of motif in Background125.4 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACCAGGATGAT
-ANCAGGATGT-
 A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGGATGAT---
CTACTAGGATGTNNTN
 A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACCAGGATGAT
-ACCCGGATGTA
 A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGATGAT
CACAGCAGGGGG--
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACCAGGATGAT
-ANCAGGAAGT-
 A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACCAGGATGAT
-AVCAGGAAGT-
 A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACCAGGATGAT
-ACCCGGAAGTA
 A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGGATGAT
GTACCCGCATN--
 A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACCAGGATGAT-
TTGCCCGGATTAGG
 A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGATGAT-
AANNATCCGGATGTNN
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C