Information for 3-NVWDACCACA (Motif 3)

T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A
Reverse Opposite:
C G A T A T C G G C A T A T C G A T C G A G C T G A C T C G T A A C T G A C G T
p-value:1e-315
log p-value:-7.265e+02
Information Content per bp:1.442
Number of Target Sequences with motif2389.0
Percentage of Target Sequences with motif36.03%
Number of Background Sequences with motif7077.1
Percentage of Background Sequences with motif16.64%
Average Position of motif in Targets99.6 +/- 54.0bp
Average Position of motif in Background99.0 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NVWDACCACA---
-NWAACCACADNN
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:NVWDACCACA-
-NAAACCACAG
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:NVWDACCACA---
--AAACCACAGAN
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:NVWDACCACA--
--AAACCACAGC
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.89
Offset:2
Orientation:forward strand
Alignment:NVWDACCACA--
--AAACCACANN
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.80
Offset:2
Orientation:forward strand
Alignment:NVWDACCACA--
--AAACCGCAAA
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:NVWDACCACA-
--AAACCGCAA
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:NVWDACCACA
---ATCCAC-
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:NVWDACCACA---
-GCGACCACACTG
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NVWDACCACA---
-GCGACCACCGAA
 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A