Information for 5-NVCAGCTGKNNN (Motif 5)

T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
Reverse Opposite:
G C A T C G T A T A C G T G A C A G T C C G T A A C T G G T A C C G A T A C T G A C T G A G T C
p-value:1e-161
log p-value:-3.728e+02
Information Content per bp:1.620
Number of Target Sequences with motif1553.0
Percentage of Target Sequences with motif23.42%
Number of Background Sequences with motif4896.0
Percentage of Background Sequences with motif11.52%
Average Position of motif in Targets100.7 +/- 54.7bp
Average Position of motif in Background98.3 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:1
Score:0.99
Offset:-1
Orientation:reverse strand
Alignment:-NVCAGCTGKNNN
DRVCAGCTGK---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G A C G T A C G T A C G T

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-NVCAGCTGKNNN
NAMCAGCTGK---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NVCAGCTGKNNN
NVCAGCTGBBNN
 T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-NVCAGCTGKNNN
NAACAGCTGT---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NVCAGCTGKNNN
-GCAGCTGTNN-
 T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-NVCAGCTGKNNN
NAHCAGCTGD---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--NVCAGCTGKNNN
VNAVCAGCTGGC--
 A C G T A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-NVCAGCTGKNNN
CAGCAGCTGN---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NVCAGCTGKNNN
-VCAGCTGBNN-
 T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-NVCAGCTGKNNN
NAACAGCTGG---
 A C G T T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T