Information for 24-GTTATGAY (Motif 9)

A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C
Reverse Opposite:
C T A G C A G T G T A C C G T A A C G T C G T A C G T A A G T C
p-value:1e-33
log p-value:-7.649e+01
Information Content per bp:1.853
Number of Target Sequences with motif555.0
Percentage of Target Sequences with motif8.37%
Number of Background Sequences with motif2067.1
Percentage of Background Sequences with motif4.86%
Average Position of motif in Targets98.6 +/- 56.4bp
Average Position of motif in Background102.6 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GTTATGAY--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GTTATGAY---
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GTTATGAY-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTATGAY
NTTTTATGAC
 A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTATGAY
TTTTATTGC
 A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GTTATGAY---
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTATGAY--
TTTTATGGCTN
 A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTTATGAY-
NTTTTATTACN
 A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTTATGAY----
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTATGAY
GTCATN--
 A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T