Information for 25-ACTTGGCC (Motif 11)

C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A G T C C G T A C G T A A C T G C G A T
p-value:1e-14
log p-value:-3.450e+01
Information Content per bp:1.929
Number of Target Sequences with motif385.0
Percentage of Target Sequences with motif5.81%
Number of Background Sequences with motif1636.8
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets323.4 +/- 238.9bp
Average Position of motif in Background274.0 +/- 176.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-ACTTGGCC--
TACTTGGCAGA
 A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCC--
-NTTGGCANN
 C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCC-
-CTAGGCCT
 C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACTTGGCC--
NNTTGGCANN
 C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCC
ACACGTGGC-
 A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

MYC/MA0147.3/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACTTGGCC
NNGCACGTGGNN
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGGCC-
TGACCTTGACCT
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCC-
-CTTGGCAA
 C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCC-
NNACTTGCCTT
 A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCC-
-CNAGGCCT
 C G T A A G T C A C G T A C G T A C T G A C T G A T G C A G T C A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T