Information for 18-GTCTAGAC (Motif 8)

A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
p-value:1e-63
log p-value:-1.451e+02
Information Content per bp:1.530
Number of Target Sequences with motif171.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif219.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets313.5 +/- 202.9bp
Average Position of motif in Background261.4 +/- 169.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAGAC-
TGTCTAGACG
 A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GTCTAGAC-
-TCTAGACA
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCTAGAC------
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGAC
CTGTCTGG--
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTAGAC--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTCTAGAC
VBSYGTCTGG--
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGAC
TWGTCTGV--
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GTCTAGAC---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

TP73/MA0861.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTCTAGAC-----
GACATGTCTGGACATGTC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTAGAC-----
TTCTAGAACGTTC
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C