Information for 9-ARCAGCTG (Motif 5)

C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C G T A C T G A G T C G A C T
p-value:1e-159
log p-value:-3.684e+02
Information Content per bp:1.869
Number of Target Sequences with motif3111.0
Percentage of Target Sequences with motif44.30%
Number of Background Sequences with motif12413.9
Percentage of Background Sequences with motif29.08%
Average Position of motif in Targets320.4 +/- 225.8bp
Average Position of motif in Background285.1 +/- 185.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ARCAGCTG
AACAGCTG
 C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ARCAGCTG-
CAGCAGCTGN
 A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--ARCAGCTG--
NNAGCAGCTGCT
 A C G T A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ARCAGCTG---
GACAGCTGCAG
 C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ARCAGCTG---
AACAGCTGCAG
 C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-ARCAGCTG-
BAACAGCTGT
 A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-ARCAGCTG-
NAHCAGCTGD
 A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---ARCAGCTG--
NGNGACAGCTGCN
 A C G T A C G T A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:ARCAGCTG---
-GCAGCTGTNN
 C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-ARCAGCTG-
NAACAGCTGG
 A C G T C T G A T C A G A G T C C G T A A C T G A G T C A C G T A C T G A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G